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Department of Cell and Developmental Biology

CDB Student Publications

Student Publications

SnowJP, WestlakeG, KlofasLK, JeonS, ArmstrongLC, SwobodaKJ, GeorgeAL, EssKC, Neuronal modeling of alternating hemiplegia of childhood reveals transcriptional compensation and replicates a trigger-induced phenotypeNeurobiology of disease. 2020 Apr 27 141 104881
FryeK, RendaF, FomichevaM, ZhuX, GongL, KhodjakovA, KaverinaI, Cell Cycle-Dependent Dynamics of the Golgi-Centrosome Association in Motile CellsCells. 2020 Apr 25 9 (5).
GuillenRX, BeckleyJR, ChenJS, GouldKL, CRISPR-mediated gene targeting of CK1δ/ε leads to enhanced understanding of their role in endocytosis via phosphoregulation of GAPVD1Scientific reports. 2020 Apr 22 10 (1). 6797
TanejaN, NeiningerAC, BurnetteDT, Coupling to substrate adhesions drives the maturation of muscle stress fibers into myofibrils within cardiomyocytesMolecular biology of the cell. 2020 Apr 8 mbcE19110652
TanejaN, BersiMR, BaillargeonSM, FenixAM, CooperJA, OhiR, GamaV, MerrymanWD, BurnetteDT, Precise Tuning of Cortical Contractility Regulates Cell Shape during CytokinesisCell reports. 2020 Apr 7 31 (1). 107477
BryanAF, WangJ, HowardGC, GuarnacciaAD, WoodleyCM, AhoER, RellingerEJ, MatlockBK, FlahertyDK, LoreySL, ChungDH, FesikSW, LiuQ, WeissmillerAM, TanseyWP, WDR5 is a conserved regulator of protein synthesis gene expressionNucleic acids research. 2020 Apr 6 48 (6). 2924-2941
TumoloJM, HepowitNL, JoshiSS, MacGurnJA, A Snf1-related nutrient-responsive kinase antagonizes endocytosis in yeastPLoS genetics. 2020 Mar 19 16 (3). e1008677
RobertsonGL, Romero-MoralesAI, LippmannES, GamaV, Uncovering cell biology in the third dimensionMolecular biology of the cell. 2020 Mar 1 31 (5). 319-323
NielsenCP, MacGurnJA, Coupling Conjugation and Deconjugation Activities to Achieve Cellular Ubiquitin DynamicsTrends in biochemical sciences. 2020 Feb 28 45 (5). 427-439
BhattacharjeeR, MangioneMC, WosM, ChenJS, SniderCE, Roberts-GalbraithRH, McDonaldNA, PrestiLL, MartinSG, GouldKL, DYRK kinase Pom1 drives F-BAR protein Cdc15 from the membrane to promote medial divisionMolecular biology of the cell. 2020 Feb 26 31 (9). 917-929
UnluG, QiX, GamazonER, MelvilleDB, PatelN, RushingAR, HashemM, Al-FaifiA, ChenR, LiB, CoxNJ, AlkurayaFS, KnapikEW, Phenome-based approach identifies RIC1-linked Mendelian syndrome through zebrafish models, biobank associations and clinical studiesNature medicine. 2020 Jan 13 26 (1). 98-109
NeiningerAC, LongJH, BaillargeonSM, BurnetteDT, A simple and flexible high-throughput method for the study of cardiomyocyte proliferationScientific reports. 2019 Nov 4 9 (1). 15917
MangioneMC, SniderCE, GouldKL, The intrinsically disordered region of the cytokinetic F-BAR protein Cdc15 performs a unique essential function in maintenance of cytokinetic ring integrityMolecular biology of the cell. 2019 Oct 15 30 (22). 2790-2801
Cuentas-CondoriA, MulcahyB, HeS, PalumbosS, ZhenM, MillerDM, C. elegans neurons have functional dendritic spineseLife. 2019 Oct 4 8
ShimizuT, SohnY, ChoiE, PetersenCP, PrasadN, GoldenringJR, Decrease in miR-148a expression during initiation of chief cell transdifferentiationCellular and molecular gastroenterology and hepatology. 2019 Aug 29
PostemaMM, Grega-LarsonNE, MeenderinkLM, TyskaMJ, PACSIN2-dependent apical endocytosis regulates the morphology of epithelial microvilliMolecular biology of the cell. 2019 Aug 7 mbcE19060352
MacQuarrieCD, MangioneMC, CarrollR, JamesM, GouldKL, SirotkinV, Adaptor protein Bbc1 regulates localization of Wsp1 and Vrp1 during endocytic actin patch assemblyJournal of cell science. 2019 Aug 7
MeenderinkLM, GaetaIM, PostemaMM, CencerCS, ChinowskyCR, KrystofiakES, MillisBA, TyskaMJ, Actin Dynamics Drive Microvillar Motility and Clustering during Brush Border AssemblyDevelopmental cell. 2019 Jul 30
NielsenCP, JerniganKK, DigginsNL, WebbDJ, MacGurnJA, USP9X Deubiquitylates DVL2 to Regulate WNT Pathway SpecificationCell reports. 2019 Jul 23 28 (4). 1074-1089.e5
AhoER, WeissmillerAM, FesikSW, TanseyWP, Targeting WDR5: A WINning Anti-Cancer Strategy?Epigenetics insights. 2019 Jul 18 12 2516865719865282
QuX, VioletteK, Sewell-LoftinMK, SoslowJ, Saint-JeanL, HintonRB, MerrymanWD, BaldwinHS, Loss of flow responsive Tie1 results in Impaired
Aortic valve remodelingDevelopmental biology. 2019 Jul 15
Saint-JeanL, BarkasN, HarmelinkC, TompkinsKL, OakeyRJ, BaldwinHS, Myocardial differentiation is dependent upon endocardial signaling during early cardiogenesisDevelopment (Cambridge, England). 2019 May 8 146 (9).
MeyerAR, EngevikAC, WilletSG, WilliamsJA, ZouY, MassionPP, MillsJC, ChoiE, GoldenringJR, Cystine/glutamate antiporter (xCT) is required for chief cell plasticity after gastric injuryCellular and molecular gastroenterology and hepatology. 2019 May 6
NeitzelLR, SpencerZT, NayakA, CselenyiCS, BenchabaneH, YoungbloodCQ, ZouaouiA, NgV, StephensL, HannT, PattonJG, RobbinsD, AhmedY, LeeE, Developmental regulation of Wnt signaling by Nagk and the UDP-GlcNAc salvage pathwayMechanisms of development. 2019 Mar 20
AhoER, WangJ, GogliottiRD, HowardGC, PhanJ, AcharyaP, MacdonaldJD, ChengK, LoreySL, LuB, WenzelS, FoshageAM, AlvaradoJ, WangF, ShawJG, ZhaoB, WeissmillerAM, ThomasLR, VakocCR, HallMD, HiebertSW, LiuQ, StaufferSR, FesikSW, TanseyWP, Displacement of WDR5 from Chromatin by a WIN Site Inhibitor with Picomolar AffinityCell reports. 2019 Mar 12 26 (11). 2916-2928.e13
HowardAM, LaFeverKS, FenixAM, ScurrahCR, LauKS, BurnetteDT, BhaveG, FerrellN, Page-McCawA, DSS-induced damage to basement membranes is repaired by matrix replacement and crosslinkingJournal of cell science. 2019 Mar 5
TanejaN, BurnetteDT, Myosin IIA drives membrane bleb retractionMolecular biology of the cell. 2019 Feb 20 mbcE18110752
MalabyHLH, DumasME, OhiR, StumpffJ, Kinesin-binding protein ensures accurate chromosome segregation by buffering KIF18A and KIF15The Journal of cell biology. 2019 Feb 1
FoegedingNJ, RaghunathanK, CampbellAM, KimSW, LauKS, KenworthyAK, CoverTL, OhiMD, Intracellular degradation of VacA toxin as a determinant of gastric epithelial cell viabilityInfection and immunity. 2019 Jan 28
ThompsonJJ, ShortSP, ParangB, BrownRE, LiC, NgVH, Saito-DiazK, ChoksiYA, WashingtonMK, SmithJJ, FingletonB, BrandT, LeeE, CoffeyRJ, WilliamsCS, Blood vessel epicardial substance (BVES) reduces LRP6 receptor and cytoplasmic -catenin levels to modulate Wnt signaling and intestinal homeostasisCarcinogenesis. 2019 Jan 23
WintersNI, BurmanA, KropskiJA, BlackwellTS, Epithelial Injury and Dysfunction in the Pathogenesis of Idiopathic PulmonaryFibrosisThe American journal of the medical sciences. 2019 Jan 22 357 (5). 374-378
LiuJ, BanerjeeA, HerringCA, AttallaJ, HuR, XuY, ShaoQ, SimmonsAJ, DadiPK, WangS, JacobsonDA, LiuB, HodgesE, LauKS, GuG, Neurog3-Independent Methylation Is the Earliest Detectable Mark Distinguishing Pancreatic Progenitor IdentityDevelopmental cell. 2019 Jan 7 48 (1). 49-63.e7
VegaPN, LauKS, GoldenringJR, Not All Insults Are Created Equal for Awakening Dormant Stem Cell AbilitiesCellular and molecular gastroenterology and hepatology. 2019 Jan 7 7 (3). 619-621
Ramos-LewisW, Page-McCaw A, Basement membrane mechanics shape development: Lesson from the fly.Matrix biology : journal of the International Society for Matrix Biology. 2019 Jan 4
LeeS, HoHC, TumoloJM, HsuPC, MacGurnJA, Methionine triggers Ppz-mediated dephosphorylation of Art1 to promote cargo-specific endocytosisThe Journal of cell biology. 2019 Jan 4 218 (3). 977-992
McCullochKM, YamakawaI, ShifrinDA, McConnellRE, FoegedingNJ, SinghPK, MaoS, TyskaMJ, IversonTM, An alternative N-terminal fold of the intestine-specific annexin A13a induces dimerization and regulates membrane-bindingThe Journal of biological chemistry. 2019 Jan 4 294 (10). 3454-3463
JiuY, KumariR, FenixAM, SchaibleN, LiuX, VarjosaloM, KrishnanR, BurnetteDT, LappalainenP, Myosin-18B Promotes the Assembly of Myosin II Stacks for Maturation of Contractile Actomyosin BundlesCurrent biology : CB. 2018 Dec 12
FenixAM, NeiningerAC, TanejaN, HydeK, VisetsoukMR, GardeRJ, LiuB, NixonBR, ManaloAE, BeckerJR, CrawleySW, BaderDM, TyskaMJ, LiuQ, GutzmanJH, BurnetteDT, Muscle specific stress fibers give rise to sarcomeres in cardiomyocyteseLife. 2018 Dec 12 7
DumasME, ChenGY, KendrickND, XuG, LarsenSA, JanaS, WatersonAG, BauerJA, HancockW, SulikowskiGA, OhiR, Dual inhibition of Kif15 by oxindole and quinazolinedione chemical probesBioorganic & medicinal chemistry letters. 2018 Dec 4
WagnerPN, ShiQ, Salisbury-RufCT, ZouJ, SavonaMR, FedoriwY, ZinkelSS, Increased Ripk1-mediated bone marrow necroptosis leads to myelodysplasia and bone marrow failure in miceBlood. 2018 Nov 9
Salisbury-RufCT, BertramCC, VergeadeA, LarkDS, ShiQ, HeberlingML, FortuneNL, OkoyeGD, JeromeWG, WellsQS, FesselJ, MoslehiJ, ChenH, RobertsLJ, BoutaudO, GamazonER, ZinkelSS, Bid maintains mitochondrial cristae structure and function and protects against cardiac disease in an integrative genomics studyeLife. 2018 Oct 3 7
ScurrahCR, SimmonsAJ, LauKS, Single-Cell Mass Cytometry of Archived Human Epithelial Tissue for Decoding Cancer Signaling PathwaysMethods in molecular biology (Clifton, N.J.). 2018 Nov 22 1884 215-229
ChenB, HerringCA, LauKS, pyNVR: Investigating factors affecting feature selection from scRNA-seq data for lineage reconstructionBioinformatics (Oxford, England). 2018 Nov 16
AditiA, MasonAC, SharmaM, DawsonTR, WenteSR, MAPK- and glycogen synthase kinase 3-mediated phosphorylation regulates the DEAD-box protein modulator Gle1 for control of stress granule dynamicsThe Journal of biological chemistry. 2018 Nov 14
GreenplateAR, McClanahanDD, OberholtzerBK, DoxieDB, RoeCE, DigginsKE, LeelatianN, RasmussenML, KelleyMC, GamaV, SiskaPJ, RathmellJC, FerrellPB, JohnsonDB, IrishJM, Computational immune monitoring reveals abnormal double negative T cells present across human tumor typesCancer immunology research. 2018 Nov 9
LiuQ, HerringCA, ShengQ, PingJ, SimmonsAJ, ChenB, BanerjeeA, LiW, GuG, CoffeyRJ, ShyrY, LauKS, Quantitative assessment of cell population diversity in single-cell landscapesPLoS biology. 2018 Oct 22 16 (10). e2006687
TanejaN, RathbunL, HehnlyH, BurnetteDT, The balance between adhesion and contraction during cell divisionCurrent opinion in cell biology. 2018 Sep 27 56 45-52
GandelmanJS, ByrneMT, MistryAM, PolikowskyHG, DigginsKE, ChenH, LeeSJ, AroraM, CutlerC, FlowersM, PidalaJ, IrishJM, JagasiaMH, Machine learning reveals chronic graft-versus-host disease phenotypes and stratifies survival after stem cell transplant for hematologic malignanciesHaematologica. 2018 Sep 20
PostemaMM, Grega-LarsonNE, NeiningerAC, TyskaMJ, IRTKS (BAIAP2L1) Elongates Epithelial Microvilli Using EPS8-Dependent and Independent MechanismsCurrent biology : CB. 2018 Aug 31
EngevikAC, KajiI, EngevikMA, MeyerAR, WeisVG, GoldsteinA, HessMW, MüllerT, KoepsellH, DudejaPK, TyskaM, HuberLA, ShubMD, AmeenN, GoldenringJR, Loss of MYO5B Leads to Reductions in Na Absorption with Maintenance of CFTR-dependent Cl Secretion in EnterocytesGastroenterology. 2018 Aug 22
FenixAM, BurnetteDT, Assembly of Myosin II Filament Arrays: Network Contraction vs. ExpansionCytoskeleton (Hoboken, N.J.). 2018 Aug 20
NorrisSR, Jung S, Singh P, Strothman CE, Erwin AL, Ohi MD, Zanic M, Ohi R, Microtubule minus-end aster organization is driven by processive HSET-tubulin clusters.Nature communications. 2018 Jul 9 9 (1). 2659
Pinzon-GuzmanC, Meyer AR, Wise R, Choi E, Muthupalani S, Wang TC, Fox JG, Goldenring JR, Evaluation of Lineage Changes in the Gastric Mucosa Following Infection With Helicobacter pylori and…The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society. 2018 Jul 1 22155418785621
YarboroMT, DurbinMD, HeringtonJL, SheltonEL, ZhangT, EbbyCG, StollerJZ, ClymanRI, ReeseJ, Transcriptional profiling of the ductus arteriosus: Comparison of rodent microarrays and human RNA s…Seminars in perinatology. 2018 May 10
CapozziME, Giblin MJ, Penn JS, Palmitic Acid Induces Müller Cell Inflammation that is Potentiated by Co-treatment with Glucose.Scientific reports. 2018 Apr 3 8 (1). 5459
BurmanA, Tanjore H, Blackwell TS, Endoplasmic reticulum stress in pulmonary fibrosis.Matrix biology : journal of the International Society for Matrix Biology. 2018 Aug 68-69 355-365
MeyerAR, Goldenring JR, Injury, repair, inflammation and metaplasia in the stomach.The Journal of physiology. 2018 Feb 10
ManaloA, SchroerAK, FenixAM, ShancerZ, CooganJ, BrolsmaT, BurnetteDT, MerrymanWD, BaderDM, Loss of CENP-F Results in Dilated Cardiomyopathy with Severe Disruption of Cardiac Myocyte Architect…Scientific reports. 2018 May 15 8 (1). 7546
CoxNJ, Unlu G, Bisnett BJ, Meister TR, Condon BM, Luo PM, Smith TJ, Hanna M, Chhetri A, Soderblom EJ, Audhya A, Knapik EW, Boyce M, Dynamic Glycosylation Governs the Vertebrate COPII Protein Trafficking Pathway.Biochemistry. 2018 Dec 9 57 (1). 91-107
RasmussenML, Kline LA, Park KP, Ortolano NA, Romero-Morales AI, Anthony CC, Beckermann KE, Gama V, A Non-apoptotic Function of MCL-1 in Promoting Pluripotency and Modulating Mitochondrial Dynamics in…Stem cell reports. 2018 Mar 13 10 (3). 684-692
RasmussenML, Ortolano NA, Romero-Morales AI, Gama V, Wnt Signaling and Its Impact on Mitochondrial and Cell Cycle Dynamics in Pluripotent Stem Cells.Genes. 2018 Feb 19 9 (2).
NeitzelLR, Broadus MR, Zhang N, Sawyer L, Wallace HA, Merkle JA, Jodoin JN, Sitaram P, Crispi EE, Rork W, Lee LA, Pan D, Gould KL, Page-McCaw A, Lee E, Characterization of a cdc14 null allele in Drosophila melanogasterBiology open. 2018 Jun 26
WilletAH, Bohnert KA, Gould KL, Cdk1-dependent phospho-inhibition of a formin-F-BAR interaction opposes cytokinetic contractile ring…Molecular biology of the cell. 2018 Jan 17
GuarnacciaAD, Tansey WP, Moonlighting with WDR5: A Cellular Multitasker.Journal of clinical medicine. 2018 Jan 30 7 (2).
SungBH, Weaver AM, Directed migration: Cells navigate by extracellular vesicles.The Journal of cell biology. 2018 Aug 6
SniderCE, Willet AH, Brown HT, Gould KL, Analysis of the contribution of phosphoinositides to medial septation in fission yeast highlights th…Molecular biology of the cell. 2018 Jul 5 mbcE18030179
JonesCM, Chen JS, Johnson AE, Elmore ZC, Cullati SN, Beckley JR, Gould KL, Relief of the Dma1-mediated checkpoint requires Dma1 autoubiquitination and dynamic localization.Molecular biology of the cell. 2018 Jul 5 mbcE18040261
Ramos-LewisW, LaFever KS, Page-McCaw A, A scar-like lesion is apparent in basement membrane after wound repair in vivo.Matrix biology : journal of the International Society for Matrix Biology. 2018 Jul 4
AndrewsAM, McCartney HJ, Errington TM, D'Andrea AD, Macara IG, A senataxin-associated exonuclease SAN1 is required for resistance to DNA interstrand cross-links.Nature communications. 2018 Jul 3 9 (1). 2592
ElmoreZC, Guillen RX, Gould KL, The kinase domain of CK1 enzymes contains the localization cue essential for compartmentalized signa…Molecular biology of the cell. 2018 May 9 mbcE18020129
BanerjeeA, McKinley ET, von Moltke J, Coffey RJ, Lau KS, Interpreting heterogeneity in intestinal tuft cell structure and function.The Journal of clinical investigation. 2018 May 1 128 (5). 1711-1719
NgVH, Hang BI, Sawyer LM, Neitzel LR, Crispi EE, Rose KL, Popay TM, Zhong A, Lee LA, Tansey WP, Huppert S, Lee E, Phosphorylation of XIAP at threonine 180 controls its activity in Wnt signaling.Journal of cell science. 2018 Apr 20
RaghunathanK, FoegedingNJ, CampbellAM, CoverTL, OhiMD, KenworthyAK, Determinants of raft partitioning of thepore-forming toxin VacA.Infection and immunity. 2018 Mar 12
HerringCA, Chen B, McKinley ET, Lau KS, Single-Cell Computational Strategies for Lineage Reconstruction in Tissue Systems.Cellular and molecular gastroenterology and hepatology. 2018 Feb 13 5 (4). 539-548
ArmstrongLC, Westlake G, Snow JP, Cawthon B, Armour E, Bowman AB, Ess KC, Heterozygous loss of TSC2 alters p53 signaling and human stem cell reprogramming.Human molecular genetics. 2017 Dec 1 26 (23). 4629-4641
Romero-MoralesAI, Ortolano NA, Gama V, Apical polarization and lumenogenesis: The apicosome sheds new light.The Journal of cell biology. 2017 Dec 4 216 (12). 3891-3893
OrtolanoNA, GamaV, Chronicle of a Neuronal Death Foretold: Preventing Aging by Keeping MGRN1 at the Nucleus.Molecular cell. 2017 May 4 66 (3). 301-303
McDonaldNA, Lind AL, Smith SE, Li R, Gould KL, Nanoscale architecture of the Schizosaccharomyces pombe contractile ring.eLife. 2017 Sep 15 6 e28865
LeeS, Tumolo JM, Ehlinger AC, Jernigan KK, Qualls-Histed SJ, Hsu PC, McDonald WH, Chazin WJ, MacGurn JA, Ubiquitin turnover and endocytic trafficking in yeast are regulated by Ser57 phosphorylation of ubiq…eLife. 2017 Nov 13 6
HerringCA, Banerjee A, McKinley ET, Simmons AJ, Ping J, Roland JT, Franklin JL, Liu Q, Gerdes MJ, Coffey RJ, Lau KS, Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Ce…Cell systems. 2017 Nov 7
AwgulewitschCP, Trinh LT, Hatzopoulos AK, The Vascular Wall: a Plastic Hub of Activity in Cardiovascular Homeostasis and Disease.Current cardiology reports. 2017 Jun 19 (6). 51
SniderCE, Willet AH, Chen JS, Arpağ G, Zanic M, Gould KL, Phosphoinositide-mediated ring anchoring resists perpendicular forces to promote medial cytokinesis.The Journal of Cell Biology. 2017 Aug 7 216 (10). 3041-3050
BalikovDA, CrowderSW, BoireTC, LeeJB, GuptaMK, FenixAM, LewisHN, AmbroseCM, ShortPA, KimCS, BurnetteDT, ReillyMA, MurthyNS, KangML, KimWS, SungHJ, Tunable Surface Repellency Maintains Stemness and Redox Capacity of Human Mesenchymal Stem CellsACS applied materials & interfaces. 2017 Jun 29 9 (27). 22994-23006

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