New Publications
MSTPublications: August 2023
Aug. 30, 2023—Deep Learning Segmentation of the Nucleus Basalis of Meynert on 3T MRI. Doss DJ, Johnson GW, Narasimhan S, Shless JS, Jiang JW, González HFJ, Paulo DL, Lucas A, Davis KA, Chang C, Morgan VL, Constantinidis C, Dawant BM, Englot DJ. AJNR Am J Neuroradiol. 2023 Aug 10. doi: 10.3174/ajnr.A7950. Online ahead of print. Background and...
MSTPublications: July 2023
Jul. 30, 2023—Unified tumor growth mechanisms from multimodel inference and dataset integration. Beik SP, Harris LA, Kochen MA, Sage J, Quaranta V, Lopez CF. PLoS Comput Biol. 2023 Jul 5;19(7):e1011215. doi: 10.1371/journal.pcbi.1011215. eCollection 2023 Jul. Mechanistic models of biological processes can explain observed phenomena and predict responses to a perturbation. A mathematical model is typically constructed using...
New Publications: June 2023
Jun. 26, 2023—Exploratory Multisite Magnetic Resonance Spectroscopic Imaging Shows White Matter Neuroaxonal Loss Associated with Complications of Type 1 Diabetes in Children. Cai LY, Tanase C, Anderson AW, Patel NJ, Lee CA, Jones RS, LeStourgeon LM, Mahon A, Taki I, Juvera J, Pruthi S, Gwal K, Ozturk A, Kang H, Rewers A, Rewers MJ, Alonso GT, Glaser...
MSTPublications: May 2023
May. 30, 2023—A Representativeness-informed Model for Research Record Selection from Electronic Medical Record Systems. Borza VA, Clayton EW, Kantarcioglu M, Vorobeychik Y, Malin BA. AMIA Annu Symp Proc. 2023 Apr 29;2022:259-268. eCollection 2022. Scientific and clinical studies have a long history of bias in recruitment of underprivileged and minority populations. This underrepresentation leads to inaccurate, inapplicable, and...
MSTPublications: April 2023
Apr. 26, 2023—Microfluidic Platforms Promote Polarization of Human-Derived Retinal Ganglion Cells That Model Axonopathy. Boal AM, McGrady NR, Chamling X, Kagitapalli BS, Zack DJ, Calkins DJ, Risner ML. Transl Vis Sci Technol. 2023 Apr 3;12(4):1. doi: 10.1167/tvst.12.4.1. Purpose: Axons depend on long-range transport of proteins and organelles which increases susceptibility to metabolic stress in disease. The axon...
MSTPublications: March 2023
Mar. 30, 2023—Linking rare and common disease vocabularies by mapping between the human phenotype ontology and phecodes. McArthur E, Bastarache L, Capra JA. JAMIA Open. 2023 Feb 28;6(1):ooad007. doi: 10.1093/jamiaopen/ooad007. eCollection 2023 Apr. Enabling discovery across the spectrum of rare and common diseases requires the integration of biological knowledge with clinical data; however, differences in terminologies present...
MSTP Publications: February 2023
Feb. 27, 2023—The interictal suppression hypothesis in focal epilepsy: network-level supporting evidence. Johnson GW, Doss DJ, Morgan VL, Paulo DL, Cai LY, Shless JS, Negi AS, Gummadavelli A, Kang H, Reddy SB, Naftel RP, Bick SK, Roberson SW, Dawant BM, Wallace MT, Englot DJ. Brain. 2023 Feb 1:awad016. doi: 10.1093/brain/awad016. Online ahead of print. Why are people...
MSTPublications: January 2023
Jan. 30, 2023—Prevalence, Risk Factors, and Sequelae of Asymptomatic Clostridioides difficile Colonization in Children with Cystic Fibrosis. Reasoner SA, Fazili IF, Bernard R, Parnell JM, Sokolow AG, Thomsen KF, Edwards KM, Brown RF, Nicholson MR. J Cyst Fibros. 2022 Dec 28:S1569-1993(22)01434-5. doi: 10.1016/j.jcf.2022.12.014. Online ahead of print. Patients with CF (pwCF) have high antibiotic use and an...
MSTPublications: December 2022
Dec. 27, 2022—Correlated depressive symptoms within seroconcordant, expectant partners living with HIV in Zambézia Province, Mozambique: a cross-sectional study. Sack DE, Matino A, Graves E, Emilio A, Shepherd BE, De Schacht C, Audet CM. AIDS Care. 2022 Dec 6:1-9. doi: 10.1080/09540121.2022.2151558. Online ahead of print. Approximately 15% of people with HIV in sub-Saharan Africa have comorbid depression,...
MSTPublications: November 2022
Nov. 30, 2022—T cells specific for α-myosin drive immunotherapy-related myocarditis. Axelrod ML, Meijers WC, Screever EM, Qin J, Carroll MG, Sun X, Tannous E, Zhang Y, Sugiura A, Taylor BC, Hanna A, Zhang S, Amancherla K, Tai W, Wright JJ, Wei SC, Opalenik SR, Toren AL, Rathmell JC, Ferrell PB, Phillips EJ, Mallal S, Johnson DB, Allison...